| Rank | Category | BIB | Name | Year | Team | Time | Gap | Points |
|---|
| 1 | MPI (1.) | 51 | REGRUT Marko | 2008 |  Ski Club Progress St.Ľubovňa | 00:34,64 | | 100 |
| 2 | MPI (2.) | 72 | JANURA Richard | 2008 | ŠK UNI Košice | 00:35,54 | + 00:00,90 | 80 |
| 3 | MPI (3.) | 74 | ŠIRILLA Ladislav | 2008 | ŠK UNI Košice | 00:35,82 | + 00:01,18 | 60 |
| 4 | MPI (4.) | 56 | SLOVEŇÁK Viktor | 2008 | LO MŠK Kežmarok | 00:35,98 | + 00:01,34 | 50 |
| 5 | MPI (5.) | 65 | PAVLÍK Samuel | 2008 | ŠK Junior Ski Poprad | 00:36,36 | + 00:01,72 | 45 |
| 6 | MPI (6.) | 66 | GAJAN Alan | 2008 | LK Tatranská Lomnica | 00:36,45 | + 00:01,81 | 40 |
| 7 | MPI (7.) | 73 | GUREGA Nikolas | 2008 | Ski Club Progress St.Ľubovňa | 00:36,68 | + 00:02,04 | 36 |
| 8 | MPI (8.) | 57 | SUMILAS Lucas | 2009 | Ski Club Progress St.Ľubovňa | 00:36,81 | + 00:02,17 | 32 |
| 9 | MPI (9.) | 60 | HLINKA Andrej | 2009 | Ski Club Progress St.Ľubovňa | 00:36,99 | + 00:02,35 | 29 |
| 10 | MPI (10.) | 68 | GAĽA Matúš | 2008 | SnowSports Club | 00:37,05 | + 00:02,41 | 26 |
| 11 | MPI (11.) | 67 | KUCHTA Ivan | 2008 | LO MŠK Kežmarok | 00:37,92 | + 00:03,28 | 24 |
| 12 | MPI (12.) | 58 | BEKEŠ Boris | 2008 | Ski Team Ždiar | 00:38,04 | + 00:03,40 | 22 |
| 13 | MPI (13.) | 69 | ULIČNÝ Daniel | 2008 | LO MŠK Kežmarok | 00:39,45 | + 00:04,81 | 20 |
| 14 | MPI (14.) | 52 | HUBAČ Adam | 2008 | LK Tatranská Lomnica | 00:39,53 | + 00:04,89 | 18 |
| 15 | MPI (15.) | 61 | MURCKO Maxim | 2008 | Ski Club Progress St.Ľubovňa | 00:39,59 | + 00:04,95 | 16 |
| 16 | MPI (16.) | 59 | MIHOK Tomáš | 2009 | RS sport Club Košice | 00:39,66 | + 00:05,02 | 15 |
| 17 | MPI (17.) | 53 | KULANGA Alex | 2008 | LK Tatranská Lomnica | 00:39,78 | + 00:05,14 | 14 |
| 18 | MPI (18.) | 64 | NOVOTNÝ Šimon | 2009 | LK Ski Jezersko | 00:39,94 | + 00:05,30 | 13 |
| 19 | MPI (19.) | 75 | WOLASCHKA Richard | 2008 | Bendik Racing Team | 00:40,91 | + 00:06,27 | 12 |
| 20 | MPI (20.) | 54 | JENDRUŠÁK Radko | 2009 | LK Tatranská Lomnica | 00:40,96 | + 00:06,32 | 11 |
| 21 | MPI (21.) | 63 | ŠTAFFEN Jakub | 2008 | LK Štart Bardejov | 00:41,91 | + 00:07,27 | 10 |
| 22 | MPI (22.) | 62 | HALAK Dominik | 2009 | OŠK Mlynky | 00:42,17 | + 00:07,53 | 9 |
| 23 | MPI (23.) | 70 | NOVÁČEK Matej | 2009 | ŠK Nomiland | 00:42,18 | + 00:07,54 | 8 |
| 24 | MPI (24.) | 55 | PLENCNER Johannes | 2009 | LK TJ Slovan Nálepkovo | 00:42,96 | + 00:08,32 | 7 |
| 25 | MPI (25.) | 77 | BAČA Boris | 2009 | SnowSports Club | 00:48,21 | + 00:13,57 | 6 |
| 26 | MPI (26.) | 76 | KATRENIČ Samuel | 2008 | Ski Club Progress St.Ľubovňa | 00:49,21 | + 00:14,57 | 5 |
